Cancer miRNA Regulatory Network

This page contains all miRNA mediated regulation and functional enrichment for CA Breast Richardson cluster number 66. Information about breast cancer can be found on Wikipedia, and further information about the "CA Breast Richardson" dataset can be found in Richardson et al., 2006.

Weeder-miRvestigator	PITA	TargetScan
zzz999	zzz999	zzz999

GO ID	GO Term	Annotated Genes in Cluster
GO:0000070	mitotic sister chromatid segregation	10
GO:0000075	cell cycle checkpoint	28
GO:0000076	DNA replication checkpoint	4
GO:0000077	DNA damage checkpoint	11
GO:0000082	G1/S transition of mitotic cell cycle	16
GO:0000083	regulation of transcription involved in G1/S phase of mitotic cell cycle	4
GO:0000084	S phase of mitotic cell cycle	12
GO:0000085	G2 phase of mitotic cell cycle	4
GO:0000087	M phase of mitotic cell cycle	51
GO:0000089	mitotic metaphase	3
GO:0000216	M/G1 transition of mitotic cell cycle	10
GO:0000226	microtubule cytoskeleton organization	18
GO:0000236	mitotic prometaphase	22
GO:0000278	mitotic cell cycle	71
GO:0000279	M phase	60
GO:0000280	nuclear division	50
GO:0000723	telomere maintenance	5
GO:0000724	double-strand break repair via homologous recombination	4
GO:0000725	recombinational repair	4
GO:0000819	sister chromatid segregation	10
GO:0001556	oocyte maturation	3
GO:0006259	DNA metabolic process	42
GO:0006260	DNA replication	23
GO:0006261	DNA-dependent DNA replication	12
GO:0006270	DNA-dependent DNA replication initiation	7
GO:0006271	DNA strand elongation involved in DNA replication	7
GO:0006281	DNA repair	20
GO:0006302	double-strand break repair	8
GO:0006310	DNA recombination	14
GO:0006312	mitotic recombination	4
GO:0006323	DNA packaging	16
GO:0006333	chromatin assembly or disassembly	11
GO:0006334	nucleosome assembly	11
GO:0006336	DNA replication-independent nucleosome assembly	7
GO:0006338	chromatin remodeling	7
GO:0006511	ubiquitin-dependent protein catabolic process	14
GO:0006974	response to DNA damage stimulus	25
GO:0006996	organelle organization	73
GO:0007010	cytoskeleton organization	22
GO:0007017	microtubule-based process	26
GO:0007018	microtubule-based movement	11
GO:0007049	cell cycle	91
GO:0007051	spindle organization	12
GO:0007052	mitotic spindle organization	6
GO:0007059	chromosome segregation	19
GO:0007067	mitosis	50
GO:0007079	mitotic chromosome movement towards spindle pole	2
GO:0007080	mitotic metaphase plate congression	4
GO:0007091	mitotic metaphase/anaphase transition	9
GO:0007093	mitotic cell cycle checkpoint	13
GO:0007094	mitotic cell cycle spindle assembly checkpoint	6
GO:0007126	meiosis	8
GO:0007143	female meiosis	3
GO:0007144	female meiosis I	2
GO:0007346	regulation of mitotic cell cycle	20
GO:0008156	negative regulation of DNA replication	5
GO:0008283	cell proliferation	32
GO:0010498	proteasomal protein catabolic process	11
GO:0010564	regulation of cell cycle process	33
GO:0016043	cellular component organization	85
GO:0019941	modification-dependent protein catabolic process	14
GO:0022402	cell cycle process	84
GO:0022403	cell cycle phase	79
GO:0022607	cellular component assembly	30
GO:0022616	DNA strand elongation	7
GO:0030174	regulation of DNA-dependent DNA replication initiation	4
GO:0030261	chromosome condensation	5
GO:0031055	chromatin remodeling at centromere	7
GO:0031109	microtubule polymerization or depolymerization	6
GO:0031145	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	9
GO:0031497	chromatin assembly	11
GO:0031570	DNA integrity checkpoint	14
GO:0031572	G2/M transition DNA damage checkpoint	4
GO:0031576	G2/M transition checkpoint	4
GO:0031577	spindle checkpoint	7
GO:0032200	telomere organization	5
GO:0032297	negative regulation of DNA-dependent DNA replication initiation	4
GO:0032886	regulation of microtubule-based process	6
GO:0033554	cellular response to stress	26
GO:0034080	CenH3-containing nucleosome assembly at centromere	7
GO:0034508	centromere complex assembly	4
GO:0034621	cellular macromolecular complex subunit organization	25
GO:0034622	cellular macromolecular complex assembly	21
GO:0034724	DNA replication-independent nucleosome organization	7
GO:0034728	nucleosome organization	11
GO:0043161	proteasomal ubiquitin-dependent protein catabolic process	11
GO:0043632	modification-dependent macromolecule catabolic process	14
GO:0043933	macromolecular complex subunit organization	29
GO:0044257	cellular protein catabolic process	14
GO:0044265	cellular macromolecule catabolic process	19
GO:0045842	positive regulation of mitotic metaphase/anaphase transition	2
GO:0048285	organelle fission	50
GO:0048478	replication fork protection	2
GO:0050000	chromosome localization	6
GO:0051052	regulation of DNA metabolic process	9
GO:0051276	chromosome organization	34
GO:0051301	cell division	46
GO:0051303	establishment of chromosome localization	6
GO:0051305	chromosome movement towards spindle pole	2
GO:0051310	metaphase plate congression	5
GO:0051319	G2 phase	4
GO:0051320	S phase	14
GO:0051321	meiotic cell cycle	8
GO:0051323	metaphase	3
GO:0051325	interphase	29
GO:0051327	M phase of meiotic cell cycle	8
GO:0051329	interphase of mitotic cell cycle	28
GO:0051340	regulation of ligase activity	8
GO:0051351	positive regulation of ligase activity	6
GO:0051352	negative regulation of ligase activity	6
GO:0051382	kinetochore assembly	3
GO:0051383	kinetochore organization	4
GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6
GO:0051437	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	6
GO:0051438	regulation of ubiquitin-protein ligase activity	8
GO:0051439	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	8
GO:0051443	positive regulation of ubiquitin-protein ligase activity	6
GO:0051444	negative regulation of ubiquitin-protein ligase activity	6
GO:0051603	proteolysis involved in cellular protein catabolic process	14
GO:0051640	organelle localization	10
GO:0051656	establishment of organelle localization	8
GO:0051726	regulation of cell cycle	39
GO:0051782	negative regulation of cell division	2
GO:0051983	regulation of chromosome segregation	4
GO:0051984	positive regulation of chromosome segregation	2
GO:0051987	positive regulation of attachment of spindle microtubules to kinetochore	2
GO:0051988	regulation of attachment of spindle microtubules to kinetochore	2
GO:0065003	macromolecular complex assembly	26
GO:0065004	protein-DNA complex assembly	13

miRNA	Method	GO ID	GO Term	Overlap	GO Annotated Genes	Cluster Size	miRNA Targets Genes	P-Value

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